Use Case Recipes

Each recipe answers: 'I have X. I want Y. What's the path?' Recipes compose platform features.

Index only. Full per-recipe walkthroughs (composition + decision tree + worked example) live in the working spec at specs/2026-05-21-platform-documentation-v1.md Part B.
R1Rank existing candidates
Ready
Input: N FASTA sequences for a target → Output: Top-N ranked candidates
R2Affinity-mature a wet-lab parent (BCMA workflow)
Ready
Input: Wet-lab-validated parent binder → Output: Improved variants via partial diffusion
R3De novo VHH against an epitope
Ready
Input: Target structure + chosen epitope patch → Output: 100+ novel VHH candidates
R4Competitor + mutation-resistance analysis (CT103a vs Cilta-cel)
Gap
Input: Two binders + target + variants → Output: Epitope overlap + per-mutation binding delta
R5mRNA-LNP-ready CAR design
Partial
Input: Target + in-vivo CAR intent → Output: VHH + CAR cassette + codon-optimized mRNA
R6Bispecific (TCE) dual-binder sanity check
Gap
Input: Tumor-arm + CD3-arm binders → Output: 4-chain complex structural validation
R7Display-ready export
Gap
Input: Top-N candidates → Output: Synthesis-ready DNA constructs (yeast / phage)
R8Browse + filter existing BCMA designs
Ready
Input: (nothing) → Output: Filtered / sorted candidate view
R9Agent-driven workflow (natural language)
Ready
Input: A question, no UI in mind → Output: Agent plans-as-DAG and executes